R Under development (unstable) (2026-03-26 r89724 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> # Setting the CPU Thread limit to max 2 to meet CRAN guidelines. 
> Sys.setenv("OMP_THREAD_LIMIT" = 2)
> 
> library(testthat)
> library(APCalign)
> 
> test_check("APCalign")

Loading resources into memory...

===========================
=====================================================
================================================================================
...done

Loading resources into memory...

===========================[ FAIL 0 | WARN 0 | SKIP 20 | PASS 138 ]

══ Skipped tests (20) ══════════════════════════════════════════════════════════
• On CRAN (20): 'test-cache.R:2:3', 'test-cache.R:10:3', 'test-cache.R:19:3',
  'test-cache.R:27:3', 'test-cache.R:40:3', 'test-cache.R:51:3',
  'test-cache.R:80:3', 'test-cache.R:92:3', 'test-cache.R:108:3',
  'test-connection.R:85:3', 'test-taxonomic_resources_structure.R:4:3',
  'test-taxonomic_resources_structure.R:15:3',
  'test-taxonomic_resources_structure.R:27:3',
  'test-taxonomic_resources_structure.R:36:3',
  'test-taxonomic_resources_structure.R:47:3',
  'test-taxonomic_resources_structure.R:58:3',
  'test-taxonomic_resources_structure.R:67:3',
  'test-taxonomic_resources_structure.R:77:3',
  'test-taxonomic_resources_structure.R:88:3', 'test-versions.R:3:3'

[ FAIL 0 | WARN 0 | SKIP 20 | PASS 138 ]
> 
> proc.time()
   user  system elapsed 
 268.71    4.95  268.95