context("ANOPA:: Testing anopaPlot function") # expect_output( str(res), "data.frame") # expect_equal( "ggplot" %in% class(plt), TRUE) # expect_message( p <- superbPlot(dta2a, etc )) # expect_error(), expect_warning(), expect_condition( , class = "") test_that("TESTS of anopaPlot (1/2)", { old <- options() on.exit(options(old)) options(ANOPA.feedback = 'none') # shortcuts... c1B <- minimalBSExample #compiled, BS (3; suj var; N = 175) w1B <- ctow(c1B, "s", "n") l1B <- ctol(c1B, "s", "n") c2B <- twoWayExample #compiled, BS (2x3; suj var; N = 72) w2B <- ctow(c2B, "success", "total") l2B <- ctol(c2B, "success", "total") w1W <- minimalWSExample #wide, WS ((3); 19 suj; N = 19) c1W <- wtoc(w1W, c("bpre","b1week","b5week"), "n") l1W <- wtol(w1W, c("bpre","b1week","b5week") ) w2W <- twoWayWithinExample #wide, WS ((2x3); 30 suj; N = 30) c2W <- wtoc(w2W, c("r11","r12","r13","r21","r22","r23"), "n") l2W <- wtol(w2W, c("r11","r12","r13","r21","r22","r23") ) wWB <- minimalMxExample #wide, Mix (3x(3); 8 suj; N = 24) cWB <- wtoc(wWB, c("bpre", "bpost", "b1week", "b5week"), "n") lWB <- wtol(wWB, c("bpre", "bpost", "b1week", "b5week") ) b <- anopa( {s;n} ~ state, c1B) plt <- anopaPlot(b) expect_equal( "ggplot" %in% class(plt), TRUE) plt <- anopaPlot(b, ~ state) expect_equal( "ggplot" %in% class(plt), TRUE) expect_error( plt <- anopaPlot(b, 3 +3) ) # error 211 expect_error(plt <- anopaPlot(b, s ~ state) ) # error 212 expect_error(plt <- anopaPlot(b, ~ state * moment | Id))# error 213 expect_error(plt <- anopaPlot(b, ~ moment) ) # error 214 expect_error( plt <- anopaPlot(b, ~ state * moment) ) # error 214 w <- anopa( cbind(bpre,b1week,b5week) ~ ., w1W, WSFactors="Moment(3)") plt <- anopaPlot(w) expect_equal( "ggplot" %in% class(plt), TRUE) plt <- anopaPlot(w, ~ Moment) expect_equal( "ggplot" %in% class(plt), TRUE) expect_error(plt <- anopaPlot(w, 3 +3)) # error 211 expect_error(plt <- anopaPlot(w, s ~ Moment)) # error 212 expect_error(plt <- anopaPlot(w, ~ state * Moment | Id))# error 213 expect_error(plt <- anopaPlot(w, ~ state) ) # error 214 expect_error(plt <- anopaPlot(w, ~ state * Moment)) # error 214 m <- anopa( cbind(bpre,b1week,b5week) ~ Status, wWB, WSFactors="Moment(3)") plt1 <- anopaPlot(m) # Ok expect_equal( "ggplot" %in% class(plt1), TRUE) plt2 <- anopaPlot(m, ~ Moment) # Ok expect_equal( "ggplot" %in% class(plt2), TRUE) plt3 <- anopaPlot(m, ~ Status) # Ok expect_equal( "ggplot" %in% class(plt3), TRUE) plt4 <- anopaPlot(m, ~ Moment * Status) # Ok expect_equal( "ggplot" %in% class(plt4), TRUE) plt5 <- anopaPlot(m, ~ Status * Moment) # Ok expect_equal( "ggplot" %in% class(plt5), TRUE) expect_error( anopaPlot(m, 3 +3) ) # error 211 expect_error( anopaPlot(m, s ~ Status) ) # error 212 expect_error( anopaPlot(m, ~ Moment * Status | Id)) # error 213 expect_error( anopaPlot(m, ~ state) ) # error 214 expect_error( anopaPlot(m, ~ mm * Status) ) # error 214 expect_error( anopaPlot(m, ~ Moment * sst) ) # error 214 # with options pltA <- anopaPlot(m, errorbarParams = list( width =0.1, linewidth=2.0 )) expect_equal( "ggplot" %in% class(pltA), TRUE) pltB <- anopaPlot(w, plotStyle = "bar") expect_equal( "ggplot" %in% class(pltB), TRUE) pltC <- anopaPlot(w, plotStyle = "bar", barParams = list(width = .2)) expect_equal( "ggplot" %in% class(pltC), TRUE) pltD <- anopaPlot(w, plotStyle = "bar", barParams = list(width = .2), errorbarParams = list(width =0.1, linewidth = 2.75) ) expect_equal( "ggplot" %in% class(pltD), TRUE) }) test_that("TESTS of anopaPlot (2/2)", { old <- options() on.exit(options(old)) options(ANOPA.feedback = 'none') w <- anopa( {s;n} ~ Location * Trophism * Diel, ArringtonEtAl2002) plt <- anopaPlot(w) expect_equal( "ggplot" %in% class(plt), TRUE) #plt <- anopaPlot(w, ~ Diel * Trophism * Location ) # slow #expect_equal( "ggplot" %in% class(plt), TRUE) plt <- anopaPlot(w, plotStyle = "bar") expect_equal( "ggplot" %in% class(plt), TRUE) plt <- anopaPlot(w, plotStyle = "bar", errorbarParams = list( width =0.9, linewidth=0.1, color="black" ) ) expect_equal( "ggplot" %in% class(plt), TRUE) #plt1 <- anopaPlot(w, ~ Trophism) # slow #expect_equal( "ggplot" %in% class(plt1), TRUE) #plt2 <- anopaPlot(w, ~ Diel * Location) # slow #expect_equal( "ggplot" %in% class(plt2), TRUE) # forces a linear scale library(ggplot2) expect_message(plt3 <- anopaPlot(w) + ylim(0.0,1.0) + theme_classic() ) expect_equal( "ggplot" %in% class(plt3), TRUE) expect_message(plt4 <- anopaPlot(w, ~ Diel * Location) + ylim(0.0,1.0) + theme_classic() ) expect_equal( "ggplot" %in% class(plt4), TRUE) })