# ==================================================================== # # TITLE: # # AMR: An R Package for Working with Antimicrobial Resistance Data # # # # SOURCE CODE: # # https://github.com/msberends/AMR # # # # PLEASE CITE THIS SOFTWARE AS: # # Berends MS, Luz CF, Friedrich AW, et al. (2022). # # AMR: An R Package for Working with Antimicrobial Resistance Data. # # Journal of Statistical Software, 104(3), 1-31. # # https://doi.org/10.18637/jss.v104.i03 # # # # Developed at the University of Groningen and the University Medical # # Center Groningen in the Netherlands, in collaboration with many # # colleagues from around the world, see our website. # # # # This R package is free software; you can freely use and distribute # # it for both personal and commercial purposes under the terms of the # # GNU General Public License version 2.0 (GNU GPL-2), as published by # # the Free Software Foundation. # # We created this package for both routine data analysis and academic # # research and it was publicly released in the hope that it will be # # useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. # # # # Visit our website for the full manual and a complete tutorial about # # how to conduct AMR data analysis: https://amr-for-r.org # # ==================================================================== # test_that("test-translate.R", { skip_on_cran() expect_identical(mo_genus("B_GRAMP", language = "pt"), "(gênero desconhecido)") expect_identical(mo_fullname("CoNS", "cs"), "Koaguláza-negativní stafylokok (KNS)") expect_identical(mo_fullname("CoNS", "da"), "Koagulase-negative stafylokokker (KNS)") expect_identical(mo_fullname("CoNS", "de"), "Koagulase-negative Staphylococcus (KNS)") expect_identical(mo_fullname("CoNS", "el"), "Σταφυλόκοκκος με αρνητική πηκτικότητα (CoNS)") expect_identical(mo_fullname("CoNS", "en"), "Coagulase-negative Staphylococcus (CoNS)") expect_identical(mo_fullname("CoNS", "es"), "Staphylococcus coagulasa negativo (SCN)") expect_identical(mo_fullname("CoNS", "fi"), "Koagulaasinegatiivinen stafylokokki (KNS)") expect_identical(mo_fullname("CoNS", "fr"), "Staphylocoque à coagulase négative (CoNS)") expect_identical(mo_fullname("CoNS", "it"), "Stafilococco coagulasi-negativo (CoNS)") expect_identical(mo_fullname("CoNS", "ja"), "コアグラーゼ陰性ブドウ球菌 (グラム陰性)") expect_identical(mo_fullname("CoNS", "nl"), "Coagulase-negatieve Staphylococcus (CNS)") expect_identical(mo_fullname("CoNS", "no"), "Koagulase-negative stafylokokker (KNS)") expect_identical(mo_fullname("CoNS", "pl"), "Staphylococcus koagulazoujemny (CoNS)") expect_identical(mo_fullname("CoNS", "pt"), "Staphylococcus coagulase negativo (CoNS)") expect_identical(mo_fullname("CoNS", "ro"), "Stafilococ coagulazo-negativ (SCN)") expect_identical(mo_fullname("CoNS", "ru"), "Коагулазоотрицательный стафилококк (КОС)") expect_identical(mo_fullname("CoNS", "sv"), "Koagulasnegativa stafylokocker (KNS)") expect_identical(mo_fullname("CoNS", "tr"), "Koagülaz-negatif Stafilokok (KNS)") expect_identical(mo_fullname("CoNS", "uk"), "Коагулазонегативний стафілокок (КНС)") expect_identical(mo_fullname("CoNS", "zh"), "凝固酶阴性葡萄球菌 (CoNS)") expect_error(mo_fullname("CoNS", "aa")) # a translation is never translated again, such as "Ticarcillin" to "Ticarcilline" and then to "Ticarcillinee" expect_identical(ab_name("TCC", language = "nl"), "Ticarcilline/clavulaanzuur") expect_identical(ab_name("TCC", language = "fr"), "Ticarcilline/acide clavulanique") expect_identical(ab_name(c("RIF", "PEN"), language = "it"), c("Rifampicina", "Benzilpenicillina")) expect_identical(ab_name("AKF", language = "nl"), "Amikacine/fosfomycin") expect_identical(AMR:::translate_into_language(c("Syndromic Group", "Streptococcus Group A", "Salmonella group B", "biogroup 1"), language = "fr"), c("Groupe syndromique", "Streptococcus Groupe A", "Salmonella groupe B", "biogroupe 1")) expect_identical(mo_name(c("B_STRPT_GRPA", "B_SLMNL_GRPB"), language = "fr"), c("Streptococcus groupe A", "Salmonella groupe B")) for (lang in setdiff(AMR:::LANGUAGES_SUPPORTED, "en")) { translated <- AMR:::translate_into_language(AMR::antimicrobials$name, language = lang, only_affect_ab_names = TRUE) expect_false(any(translated %like_case% "(cillinee|mycinee|cinaa|cillinaa)"), info = lang) } })